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53%
HPC Container Maker
13.06.2018
Home »  HPC  »  Articles  » 
.1.0') Notice that the Open MPI building block is used in this recipe. For this example, it is not used with CUDA or InfiniBand. To build it, I’ve chosen the GCC compilers. (Note that the higher level gnu
53%
OpenMP – Coding Habits and GPUs
13.06.2019
Home »  HPC  »  Articles  » 
with no code changes. Fewest Parallel Regions The first habit I’ve gotten into is using the fewest parallel regions possible. Just the creation and destruction of a parallel region can take tens
53%
OpenACC – Porting Code
07.03.2019
Home »  HPC  »  Articles  » 
, I've found one of the first places to start is with loops. The basics of using OpenACC directives for loops was covered in the first OpenACC article in this series. The first step you want to take
53%
OpenMP – Loops and Data Control
08.05.2019
Home »  HPC  »  Articles  » 
  are to be shared among all of the threads. As you can see, a number of clauses give you a great deal of freedom. Rather than focus on all of them, I will only discuss a few that I've found useful
53%
More Best Practices for HPC Containers
19.02.2020
Home »  HPC  »  Articles  » 
, either. The only two I’ve really used are: -f – allows you to use a file with a name other than dockerfile --squash – allows you to squash newly built layers into a new single layer
53%
Prolog and Epilog Scripts
07.07.2021
Home »  HPC  »  Articles  » 
 with rebooting, and it can clear up some issues. However, I’ve never tested this, and I don’t know how this interacts with the resource manager. I recommend testing this process before putting it into production
53%
Darshan I/O Analysis for Deep Learning Frameworks
18.08.2021
Home »  HPC  »  Articles  » 
(no pre-trained models) and run it for 100 epochs. I've updated the training script to checkpoint the model weights after every epoch to the same file (it just overwrites). The code is written
53%
Processor and Memory Affinity Tools
14.09.2021
Home »  HPC  »  Articles  » 
the hardware layout of your system. Although it can include PCIe connections as well, I’ve chosen not to display that output. Figure 1: lstopo output for sample
53%
Parallel and Encrypted Compression
09.12.2021
Home »  HPC  »  Articles  » 
to compress. Other data types tend to fall between these two guideposts. With enough googling, you will find several articles that use various metrics to compare various compression codes and compression tool
53%
Warewulf 4 – Python and Jupyter Notebooks
13.04.2023
Home »  HPC  »  Articles  » 
installations of the same modules. I'll walk through installing a Python environment with Anaconda on the Warewulf 4 cluster I've been writing about in previous articles. The Anaconda installation will include

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